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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
THCA cis rs2076028 1 rs6001175 chr22:39018334 LOC646851 chr22:38974125-39052634:- 0.14 3.76 0.000192 Resting heart rate
THCA cis rs2076028 1 rs6001175 chr22:39018334 TOMM22 chr22:39077954-39080763:+ -0.18 -3.98 8.08E-5 Resting heart rate
THCA cis rs2076028 1 rs6001182 chr22:39047443 JOSD1 chr22:39081549-39096459:- -0.15 -3.94 9.33E-5 Resting heart rate
THCA cis rs2076028 1 rs6001182 chr22:39047443 TOMM22 chr22:39077954-39080763:+ -0.16 -3.58 0.000379 Resting heart rate
THCA cis rs2076028 1 rs6001184 chr22:39052116 JOSD1 chr22:39081549-39096459:- -0.15 -3.94 9.33E-5 Resting heart rate
THCA cis rs2076028 1 rs6001184 chr22:39052116 TOMM22 chr22:39077954-39080763:+ -0.16 -3.58 0.000379 Resting heart rate
THCA cis rs2076028 1 rs6001185 chr22:39052155 JOSD1 chr22:39081549-39096459:- -0.15 -3.94 9.33E-5 Resting heart rate
THCA cis rs2076028 1 rs6001185 chr22:39052155 TOMM22 chr22:39077954-39080763:+ -0.16 -3.58 0.000379 Resting heart rate
THCA cis rs2076028 1 rs6001188 chr22:39062194 JOSD1 chr22:39081549-39096459:- -0.15 -3.88 0.000121 Resting heart rate
THCA cis rs2076028 1 rs6001188 chr22:39062194 TOMM22 chr22:39077954-39080763:+ -0.16 -3.56 0.000406 Resting heart rate
THCA cis rs2076028 1 rs6001191 chr22:39074452 JOSD1 chr22:39081549-39096459:- -0.15 -3.89 0.000115 Resting heart rate
THCA cis rs2076028 1 rs6001191 chr22:39074452 LOC646851 chr22:38974125-39052634:- 0.13 3.4 0.000739 Resting heart rate
THCA cis rs2076028 1 rs6001191 chr22:39074452 TOMM22 chr22:39077954-39080763:+ -0.16 -3.55 0.000423 Resting heart rate
THCA cis rs2076028 1 rs6001204 chr22:39100239 LOC646851 chr22:38974125-39052634:- 0.13 3.59 0.000361 Resting heart rate
THCA cis rs2076028 1 rs6001204 chr22:39100239 TOMM22 chr22:39077954-39080763:+ -0.16 -3.5 0.000515 Resting heart rate